chimeraslayer (Broad Institute Inc)
90
Structured Review
Broad Institute Inc
chimeraslayer
Chimeraslayer, supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/chimeraslayer/chimeraslayer/10__4315_slash_jfp___21___198-53-4-5
Average 90 stars, based on 1 article reviews
Chimeraslayer, supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/chimeraslayer/chimeraslayer/10__4315_slash_jfp___21___198-53-4-5
Average 90 stars, based on 1 article reviews
chimeraslayer - by Bioz Stars,
2026-10
90/100 stars
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other:Article Title: Bacterial community diversity and variation in spray water sources and the tomato fruit surface Article Snippet: Reads meeting the above criteria underwent rigorous screening for chimeric reads (using ChimeraSlayer ( http://microbiomeutil.sourceforge.net/ - Broad Institute) and contaminants such as chloroplast and eukaryotic DNA using BLAST [ ]. Article Title: Characterization of Bacteria and Antibiotic Resistance in Commercially Produced Cheeses Sold in China Article Snippet: Chimeras were checked with ChimeraSlayer (Broad Institute, Cambridge, MA). Article Title: Rhizospheric bacterial community structure of Triticum and Aegilops revealed by pyrosequencing analysis of the 16S rRNA gene: dominance of the A genome over the B and D genomes. Article Snippet: Chimeric sequences were identified in the data set of the representative sequences using ChimeraSlayer (http://microbiomeutil. sourceforge.net/#A_CS) in QIIME and OTUs represented by those chimeric sequences were excluded from all the downstream analyses. Article Title: Watershed hydrology and salinity, but not nutrient chemistry, are associated with arid-land stream microbial diversity Article Snippet: Microbiota in streams drive many ecosystem functions, including whole-streammetabolism, nitrogen (N) cycling, and the production of basal resources that fuel stream food webs.. Interactions between surface water and shallow, subsurface groundwater produce the oxygen and nutrient gradients that influence these microbially mediated biogeochemical functions.. Microbial nutrient processing is often limited by nutrient availability, but we lack a clear understanding of the relationships between hydrology, water chemistry, microbial composition, and nutrient cycling. Article Title: Healthy infants harbor intestinal bacteria that protect against food allergy Article Snippet: Taxonomic assignments were made with the uclust consensus taxonomy assigner ; predicted chimeric sequences were removed using ChimeraSlayer (v20110519) ( http://microbiomeutil.sourceforge.net ). Article Title: 16S rRNA Gene Primer Validation for Bacterial Diversity Analysis of Vegetable Products Article Snippet: High-throughput sequencing of the 16S rRNA gene enhances understanding of microbial diversity from complex environmental samples.. The 16S rRNA gene is currently the most important target in bacterial evolution and ecology studies, particularly for determination of phylogenetic relationships among taxa, exploration of bacterial diversity in a given environment, and quantification of the relative abundance of taxa at various levels.. However, some parts of the conserved region of the bacterial 16S rRNA gene are similar to the conserved regions of plant chloroplasts and eukaryotic mitochondria. Amplification:Article Title: Assessment of Spoilage Bacterial Communities in Food Wrap and Modified Atmospheres-Packed Minced Pork Meat Samples by 16S rDNA Metagenetic Analysis Article Snippet: .. The sequences were checked for the presence of chimeric amplification using Article Title: Evaluation of Enzymatic Cleaning on Food Processing Installations and Food Products Bacterial Microflora Article Snippet: .. The sequences were checked for the presence of chimeric amplification using |